ATATGCTATT AACAAAATAA TCATGAGACT CACTTGACAT TCCATATCCC ATGAGCAAGA CGAGCAGTAA TTGCAGCAAA CGTGGCCTGA CCAGAGTAAG S AAGCCACTAT CTTAGACTGC TCGGGGTGGA AGGTCTGAGT CACCTTATTA GGTTAGAAAA AAGTGTCGAA TGATCATGAG GGGAATCTAA TATGGGTGGT S = C/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | BTBR T<+> Itpr3 |
DBA/2J |
KK/HlJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|
ss38274619 | NES09576307 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | G | G |
SNP Consensus Information | |||||||||
SNP | Consensus Type | BTBR T<+> Itpr3 |
DBA/2J |
KK/HlJ |
WSB/EiJ |
||||
rs28125699 | SNP | C | C | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss38274619 | NES09576307 | PERLEGEN | MM_PANEL | f | SNP | C/G |
Location: Chr4:89367038 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm12610 | predicted gene 12610 | within coordinates | ||||||
Gm54238 | predicted gene, 54238 | within coordinates | ||||||
Rr595207 | regulatory region 595207 | within coordinates | ||||||
Tssr37785 | transcription start site region 37785 | 1162 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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