rs28110935 SNP Detail

Summary

• ID
  rs28110935
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:97270524 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATGCATA TCTGCATTGA
  GGAAACAACA AATGTAGTGA TTAAAATGCA CCCTCTTCAA GTAATCTTCA CCTAGGTCTG
  ACAACCTGAG CAAACCATGT AACCTCTTTA GGATTTTGAT CTACCATTGA GGGACCTAAT
  AATTTCTGCC TGCTAGGAAA TTAATAGCAT GGCCCATTAC ACAACAACTG GAAGGAAACT
  Y
  AGGTTTCATG TTTGCTCAGC AACTCAGAGA AGGGTTTGAA GGTAGGTGAC CTTCATTCAC
  CATTTTATCC ACCAGTCTAC CAATTCCAGT CCCCCATTCT CATCCTCAAC TCTGTGCAGA
  ACACCTACAG GTGCTTGCAT TCCTTTTCTT TTTCCATTCC ACGTGGAGTC CACAGACACT
  CCTGGCAGAC TCACTCAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38249166	NES09523999	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28110935					SNP	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38249166	NES09523999	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:97270524 () rs orientation: forward

Symbol	Name	Function Class
Rr595553	regulatory region 595553	823 bp distal