rs28110929 SNP Detail

Summary

• ID
  rs28110929
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:97270839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGAACAC CTACAGGTGC
  TTGCATTCCT TTTCTTTTTC CATTCCACGT GGAGTCCACA GACACTCCTG GCAGACTCAC
  TCAGCTTTTC TTCCTCCTTT GCACCCTACC CTTCCAGCTT ATCCCCATTC CTTCCCACTA
  GCTTCCAATA CCTTAAAGCA AATTCTACCT GGGACCCTTA TTGATCAGGT CCTTCTGGCA
  R
  GGACTTAAAA TAAACCTTCA GCCACCAGAG TCCTAAGATA CAGAGAAAGA AATGAAAACA
  AAGGAATAGA AAACCCACAC AACAAAGATA AGACCAGATA TCAATGCCTG GAATTGCAAA
  CACAGATGCA AGACACCAGA GTAAAAGGAA AATCAGTAAC AGACAGGGAG AAAAATGTTG
  CCACTAAGAA CCCAGCAATC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38249160	NES09524005	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28110929					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38249160	NES09524005	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:97270839 () rs orientation: forward

Symbol	Name	Function Class
Rr595553	regulatory region 595553	1138 bp distal