rs28103238 SNP Detail

Summary

• ID
  rs28103238
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:96606936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAACAAATT GGACTTGTCT
  GAGAGAACAC ATAGTGAAGA GTCACATCTC AGAAGGTGTC CAAGCCCAAG GAAGCCCAAG
  GAATCTCTGC TTAGAGCTGG CTCCTTGAAA GCAGAAAATG AGCTTCAGTT ATAATCTTCT
  GGGGATTGGC TAACTAACCA GAACTTTGGA ATTCTGATGA GACAGATTCT CAGTCTAAAT
  Y
  TCCCTTTGCA AGAACAGAAA ACTGTGTGGG ATAGTAGTGT GTGGGCTTTA GGGATTGGTA
  CCAAGTGCCA ATTGCTCTTT ACAAGATAAA TCTCCCTTGG CCTTTGTCAG AGCTCAATCT
  GCCTATGAAT TTTCCTGGAC TCTATCCTCA GAAGCACCAT CTGCTAGTGA TTGTCCTACC
  ATCTGACCAC TTACCCTTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	KK/HlJ	MOLF/EiJ
ss38250969	NES09541074	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	KK/HlJ	MOLF/EiJ
rs28103238					SNP	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38250969	NES09541074	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:96606936 () rs orientation: forward

Symbol	Name	Function Class
Rr595527	regulatory region 595527	12 bp proximal