rs28094531 SNP Detail

Summary

• ID
  rs28094531
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98142275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTAAAAA ATAAAAATAA
  ACAAAAGGCA TGGTGGCATA CACTTGTGAT CCCAGCCCTG GGCAGGCTGA AATGGGCAGA
  TCCCTGCAGC TCCCTCGCCA GCTATCCTAT CAGATTGGTG CGCTTAGGAC CAACGCAAAA
  TAAACAGGAA TGTGTCTAGT GTGGAATTAC TATTCTCTCC AAGCAAACAA GTAATTTTTC
  K
  TGCTCATGTC CTTCTCTAGA TTAAATATGT CTTCAACACA ACCTCTTCTT CTCTCATATG
  CATATAGCTG ATAGACAGAC AGACAGACAG ACAGACAGGA TAGGGATGGT TGGTAGGTAG
  GTATGTAAAG AGGTAGGTAG GTTGGTAGAT ATTAACAGAA AAACCTCAAA TGCTATTTTT
  AAAAGTGACA AAAATCTAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss38244955	NES09527251	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs28094531					SNP	T	T	T	T	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38244955	NES09527251	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98142275 () rs orientation: forward

Symbol	Name	Function Class
Rr595718	regulatory region 595718	910 bp proximal
Rr595719	regulatory region 595719	1000 bp proximal