rs28084051 SNP Detail

Summary

• ID
  rs28084051
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:88461706 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTACTGT GTCAATATCT
  TCCGGGAGCT TTTCCTGATT TTCTTATTCT CACCAAGGTG GTTTGCTTTG CAGTCAGCGC
  AGTGCTTGAG AGACAGGATG GGGGAGATCG TACACAGAGA GTCCATGTTC ACATAGCCGG
  AGATGAGGAG CTTTAAGGAA TTAGTGGCTA CAAATTGATG CTGGGTTTCA GAAGACACAG
  R
  GACTGGATTA GCAGTTCTTC AGAACACGGT GAACGCAGTC TCGGGATCAG CTACTCCAAA
  TGTAGTTGTG TGGTCATTGG GATGGTAATC AAGTTGAAGC CATTTTCATT TTAAGATCCA
  ACACATAACT AAAAATTTAT GAGCCTGATA TTCATATCCT GCTTGTAAAC TCTCTCTGAG
  GATAGTCTCA TTCTCTATTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38201978	NES09560330	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28084051					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38201978	NES09560330	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:88461706 () rs orientation: forward

Symbol	Name	Function Class
Rr595011	regulatory region 595011	332 bp proximal
Rr595012	regulatory region 595012	601 bp proximal