rs28073597 SNP Detail

Summary

• ID
  rs28073597
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:74797779 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTTTACCT ACATTGTTTG
  AGATTAAAAG TGTATAGGAA GAACATGTCC ATATTCAATC CAAATCATAC TATAATCTAG
  GATGTGTCAT GTTAATTTAG ATGGCCTTTG GATATGATAT GCCAGCGCAG CCATGTTCCT
  GTATTAATAA TCTTCTACAC CTGCTAATTT AATGGTGCCT GATGGGAAGC ATGGTGAAGA
  M
  GGCTTTGCAT CACAGTCATG ATGAATGGGC TATTGTACAG GCAGTGATAT TATGATTCAG
  AGAGTTTTGT CCTAATGATC TGCTGGAGGG TTTTTCTCAA TTGAGGTTCA TTCTTGCTAG
  ATGACTCTAA GATTTTCAAG TAGTTAGACA ACAATAATAT CAACCAGCCT ACCAACCAAC
  CAACCAACCA ACCAACCAAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss38199718	NES09610215	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs28073597					SNP	A	A	A	A	A	C	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38199718	NES09610215	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:74797779 () rs orientation: forward

Symbol	Name	Function Class
Rr594034	regulatory region 594034	1444 bp distal