rs28072033 SNP Detail

Summary

• ID
  rs28072033
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:81842980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGGAAGAG GGCATGATGG
  GTGCCAGTGG TTTTCCAGGT CAGTCTCTGG ACACTGACTA CTCTATACTC CTCAGTTATT
  TTTCGTGTGC TGGCAAATTG ATGTTCACTT CTACACTAAG ATCTTGCAAT TCCCATCCTC
  TCCAAAGGAT GAGAGAAGCC ATGTCTCCCC GTATAAATCT TTTGTCCAGT AACTATTGGA
  K
  CTGGGGCTTC TCTTCCATGG TGATGAAATA AATGTTATTT TATTGAATAT CTAAAACCAG
  AAAGTAGAAA GGAAATCTTA TCTATCAAAG CTACCAGCTG AAAACTAGAA ATAAGTTATT
  AAAACATCAA TGAGAATTTT TTTCTGTTTG CTTTGTTTGT ATGTTTTATA GGATGTAACG
  CCCTTTCTCC TCTATTGCAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss38229655	NES09599042	PERLEGEN	MM_PANEL2	f	SNP	T	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs28072033					SNP	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38229655	NES09599042	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:81842980 () rs orientation: forward

Symbol	Name	Function Class
Rr594263	regulatory region 594263	413 bp distal
Rr594264	regulatory region 594264	1941 bp proximal