rs27910445 SNP Detail

Summary

• ID
  rs27910445
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:61730388 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTTAAAAG ATTAATCTCA
  TCTTTCATTA CAAATGTTTC AAGCTAACCT TCCAATGAAA AGCCATGGAT ACTAGTCCTT
  TAATCTGTGA GTCATATTGT TTTGTTCTTC AAGTGCTAAG GATTGAACCT ATGGTGTCAC
  GGTAACCTGG TCACCCACCA CTCACTGCCA GCGGGCTAGA CCCATGTCTC CAAACTTAGA
  Y
  TCTTCTACTG AAGTTACTTT AGATAATCTG AGCTCTTTCT CTATAGGAAC CTGTTCTTGT
  TCCTCTTTTG TTAGACAGTT TGTCTCAGCT TATGTGGCAT CACACATTTT TTGTATTCCA
  GTTCCTTTTC AAATAACTTC ATTACTTCTT ACCCATTCCA AATCAAATGT AAATTCCTCT
  GTGGTATTGT GTTAGGTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
ss38057773	NES09404401	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ
rs27910445					SNP	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38057773	NES09404401	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:61730388 () rs orientation: forward

Symbol	Name	Function Class
Rr593236	regulatory region 593236	762 bp distal