rs27863415 SNP Detail

Summary

• ID
  rs27863415
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:58677768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAGAGAAA CCCTGTCTTG
  AAAAAACCAA AAAAAAAAAA AAAAAAAAAA AAGAAAAAGA AAGAAAGAAA GAAAGAAAGA
  AAGAAAGAAG GAAACAAAGA ACAAAGAAAC AAAGAGAGAG AAATGGGCCC AAATCTCTTC
  AAAGTTCAGA ATCATAGGTT TGAATTCTTA TCCTGAACTG TGTTTTCCCA GTGTCAAGTT
  R
  GTAATGCTGT GTCTGGCGCT GCGGTTCAGT CATAAAAACA ATGAAACTCC ATCAGGTTGG
  GCTTGTGAGA GCAGAAAGCA AGCAGAGGGA GAAGGGTGTG ACTTCACCAT CTGAAACTCA
  GCTTTACAAA GAAAAACAGC GGAGACATGA TGTCATCCTG GAGAAGGTAG CTCCACTGTT
  CAAGCTGGCT TGACCTGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	KK/HlJ	PWD/PhJ
ss38013138	NES09393322	PERLEGEN	MM_PANEL2	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	KK/HlJ	PWD/PhJ
rs27863415					SNP	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38013138	NES09393322	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58677768 () rs orientation: forward

Symbol	Name	Function Class
Gm70394	predicted gene, 70394	within coordinates
Rr592928	regulatory region 592928	within coordinates