rs27863414 SNP Detail

Summary

• ID
  rs27863414
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:58678241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGACTGAAA CAAAGACTTC
  AAGAAGGTTT TTTTTCTTTT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT TGAATTTAGC
  ATGCTTGGAT TTAATGCAGA CCAAGGAAAG CCTCATTACT CCCCTCCTGC CTCCTTACTC
  CCAGACCTTT CAACCCCCCC CCCCCCCCCT GCGTCTGCAG GAGGCATCTG CTCTGCTCAG
  Y
  CTCCTGCTCA CAAACTGAAG GAAAGCCGCA CTTTAAATCC ACTGATGGGG AAGTCATCAA
  CTCTGAAGCT CAGCTTTGCT TTTCTGGTTT GGATTCCCTG TTGTTTTCAG TCTTTAACTT
  CCTGGAAATT AAAATAGTTG GTAAATGAAA CTTTGCAACT TAACTGGGAA AGGTCTGGTT
  TTTGATTTTG GGGTGTTTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	KK/HlJ	PWD/PhJ
ss38013137	NES09393325	PERLEGEN	MM_PANEL2	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	KK/HlJ	PWD/PhJ
rs27863414					SNP	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss38013137	NES09393325	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58678241 () rs orientation: forward

Symbol	Name	Function Class
Gm70394	predicted gene, 70394	within coordinates
Rr592928	regulatory region 592928	within coordinates