rs27810207 SNP Detail

Summary

• ID
  rs27810207
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:53336453 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGAGAAC ACATATCCTC
  ATTTTACACA AAAGATTCAA GAAAGGGTGA CTCTGGCAAA TATAGTATCT ATTCTGTAAA
  GAATACCATT GGTGGTGTTT CTTAAAATGT TAATTGGGTT TAGTATAGAA AGTTTGAAAA
  TACAGGCAAA AAATTAAAAG CACCCACCCA ATTTTGAATG CAAAGTAAGT AGTAAGATAT
  Y
  TGCATGCACC ATTGCATAAT AATTTATAAC ATATGAACAC CTAGAATAAA TCTACTACAA
  AGCACTGCCC TTTGTATTTA CCAACATATC TCTTACTAGG TTTTGTTTGA GTGATAAACT
  CTTATGATGT TTAAAATATT ATTTCATTCA CTGAAAATAA GTTTATATGC ATCTTTCTTA
  GACTTTTATC CTGTAGCTCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37971040	NES09422286	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27810207					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37971040	NES09422286	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:53336453 () rs orientation: forward

Symbol	Name	Function Class
Gm70129	predicted gene, 70129	1358 bp downstream
Rr376485	regulatory region 376485	1985 bp upstream
Rr592236	regulatory region 592236	1341 bp proximal