rs27810206 SNP Detail

Summary

• ID
  rs27810206
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:53336671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAATTTAT AACATATGAA
  CACCTAGAAT AAATCTACTA CAAAGCACTG CCCTTTGTAT TTACCAACAT ATCTCTTACT
  AGGTTTTGTT TGAGTGATAA ACTCTTATGA TGTTTAAAAT ATTATTTCAT TCACTGAAAA
  TAAGTTTATA TGCATCTTTC TTAGACTTTT ATCCTGTAGC TCAAATAAGC ATCTTTCTAC
  M
  CCTGTCCTTT GGATCAGATA TTTAGTTCTA AATAGTTATA TTTGGGAAAA ATCACATTCT
  CTATAGAAAT TAAAATTTTC TAGGTGTTTT GCAACAAATA AATCAAAGCT AAAAGAACTT
  TACTCCAAAA GAAATACCTT TTTAATGAAA ATTTATTAGC TCTGTATAGT TGTAATTGAA
  ACCTGTATTT CCAGAGCTAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37971039	NES09422288	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27810206					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37971039	NES09422288	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:53336671 () rs orientation: forward

Symbol	Name	Function Class
Gm70129	predicted gene, 70129	1576 bp downstream
Rr376485	regulatory region 376485	1767 bp upstream
Rr592236	regulatory region 592236	1123 bp proximal