rs27810202 SNP Detail

Summary

• ID
  rs27810202
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:53337674 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGACTTAAA GCCTGGATTT
  TAACTGAAAG CATTGAAGAC ACACATGTGT GTATATGCAG GTATGTAGAT ATACAGATAT
  GCAGATGTAC ATATCATATA CATATGAATA TGCACATACA CTATATATAT ATATATATAT
  ATATATATAT ATATATATGT CCCCTTTATG ACTTAGTCAC CATTAGCTTG CCTCAAACAA
  S
  CCATGTGCCC CTCTCTACTT CCCTATGTCT TCCCATAAAA CAAAGGACCT TTGTGTGAGA
  AAAGGACCAC CTGACACTAG GTCACAATCT CTGGGTCACA TTAGTTTCCC TTCTTAAAGT
  GACATTCTCA CATCCCCTGC TGTCCCCACT TCCACGGCTC ACAGAGAGCC TCTATTCTTT
  CTTGGTGTTG AGGAAGAAAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss37971035	NES09422234	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs27810202					SNP	C	C	C	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37971035	NES09422234	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:53337674 () rs orientation: forward

Symbol	Name	Function Class
Rr376485	regulatory region 376485	764 bp upstream
Rr592236	regulatory region 592236	120 bp proximal
Rr592237	regulatory region 592237	1541 bp proximal