rs27773670 SNP Detail

Summary

• ID
  rs27773670
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:33302837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGCTTGT TCTGTTGCTA
  TAACTCTGTT AGGAAAAGTA TCAGCTCAGG ACCCCCAAGA TCAAATTCTC AGCACAGAGG
  ACGTGGGCGA ATGGGAGGGG GTGGACAAAG ATGGACACCC ACAGACTGCC TCTGCTGAAT
  GGCACAGGTG GGCTATAGAC GTATAGAGCC TAGGCTACTG CCACATAGCA CACACGACAC
  R
  GGAAGAGGAA GACATTCAGA GACCTGTCCA GTGCCAAGCT ACATGGCACT GGTGGGGAAA
  GATGATCAGA GATTGCCTTC TGCTGTAGGA TGCAAGCAGG CAGAGAATGT ACAGAGCCCC
  TCCTGCACCC ATTGCATGTG GTGTGGGAAG CAGAAGATGC TACACCACAT AAAGAGGACA
  GAGGAGGTCA TCCAGAGGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37953489	NES09475005	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27773670					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37953489	NES09475005	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:33302837 () rs orientation: forward

Symbol	Name	Function Class
Gm11934	predicted gene 11934	within coordinates
Rr376310	regulatory region 376310	within coordinates
Rr590125	regulatory region 590125	427 bp proximal