rs27761656 SNP Detail

Summary

• ID
  rs27761656
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12628558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATAGTCGA GCCTGCATTT
  TAGTTCTCTC TTATGGTTCA TTTTTGTTGG TGGTTATAAT TGAAAGATTG TAATTTTGTG
  TTGTTGTTGC TGTTGACTGG TCAATTGGAC AATCTGGTGG CAGCTACCTA CTTCTAAACT
  TCACTTGTCT CACAGCAGTG CCTAGTACCT AATGCAACTT AGTCTCACCC TGGAGACGTG
  R
  GAGGATATAC TTGCAGACTG CACCGAAGCC ATTGATCACA ACAAGAAATG GAGAAAGCCG
  AAAGGGAATC CAATTTATTT TAAATAAAAC TACTCGGTTC TCCGGTGACA GATTCCAGTC
  CCACAACAGA AAGGAACTGA CAGCAGATGC TTTGGAGCCA AGACACAGCC TGAGTAATAG
  TATAGAAAAG AAATTGCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37899384	NES08638073	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27761656					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37899384	NES08638073	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12628558 () rs orientation: forward

Symbol	Name	Function Class
Gm37985	predicted gene, 37985	within coordinates
Rr589092	regulatory region 589092	821 bp distal
Rr589093	regulatory region 589093	within coordinates