rs27761655 SNP Detail

Summary

• ID
  rs27761655
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12628712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGTGCCTA GTACCTAATG
  CAACTTAGTC TCACCCTGGA GACGTGGGAG GATATACTTG CAGACTGCAC CGAAGCCATT
  GATCACAACA AGAAATGGAG AAAGCCGAAA GGGAATCCAA TTTATTTTAA ATAAAACTAC
  TCGGTTCTCC GGTGACAGAT TCCAGTCCCA CAACAGAAAG GAACTGACAG CAGATGCTTT
  R
  GAGCCAAGAC ACAGCCTGAG TAATAGTATA GAAAAGAAAT TGCTTTGAAC TTCACCCCTG
  CTTTAAATAC TTCAAATCAA TAGGGTCACA GAACTCTTTA ATAGAGTGAT GGGGTCTCGC
  CCTAGCAGAT CTGTATGTGA CAAGTTGATG TGCGTCCTAG CAGCAGGGTC ATAAAAATGG
  CAAGCTTCCC CCTGAAAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37899383	NES08638074	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27761655					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37899383	NES08638074	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12628712 () rs orientation: forward

Symbol	Name	Function Class
Gm37985	predicted gene, 37985	within coordinates
Rr589092	regulatory region 589092	975 bp distal
Rr589093	regulatory region 589093	within coordinates