rs27711803 SNP Detail

Summary

• ID
  rs27711803
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12332505 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAAA GGCCTGAATA TTCAAGGCTT
  R
  GTCCTCAGAG TATTACTCTT TGGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
ss37900422	NES08637519	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A		G	G
ss321044371	CHEV_4_12259652	CHEVERUD	SCREENING_POP	f	SNP					A			G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	LG/J	NOD/ShiLtJ	PWD/PhJ	SM/J
rs27711803					SNP	G	G	G	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37900422	NES08637519	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12332505 () rs orientation: forward

Symbol	Name	Function Class
Rr589072	regulatory region 589072	1955 bp proximal