rs27711793 SNP Detail

Summary

• ID
  rs27711793
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12333841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTATGAGAT AGTCCTGTAA
  GGATGTTGAA TAGGCAGTCC AGGGGACCAA ACTTTTCTTC TTCCTCAAGC CTGCAGTCTT
  TCTCTGGTAC GCCAGTCAAC AGAGTTGCAG GAAAAGTGGT ACTGTGGTCT GGAGGGTCCA
  GCACTGCTCT CTCTGAGCAG TAGAGAATGG ATATTAACTG GAGAAGCAAT CACTTATCCC
  M
  TCAACTGGTT ATTGTCAGCA ATCATCATTA TGACTTACAT AAAGAATCTA ATATGATGAA
  GGTCCTCATG TTGGGAGGGC TAAACCCATC AGATTTGTAA TTTGTTTTCA AGTTTGTGTT
  TGTATAGTCT TCTCTCTAAC TGCCATTCAG GATCATTCCT GTGGAGGGGT TGGCTGTGTA
  CACTTTGAAA TTAGCTAATA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37900412	NES08637482	PERLEGEN	MM_PANEL2	f	SNP	A	A	C	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27711793					SNP	A	A	C	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37900412	NES08637482	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12333841 () rs orientation: forward

Symbol	Name	Function Class
Rr589072	regulatory region 589072	619 bp proximal