rs27710372 SNP Detail

Summary

• ID
  rs27710372
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:13364989 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATTCAAT TTGCTACTGG
  AGTCTTAGAC TGAATACCAC CCCCAACCAA ACCACCACTG CCCACAAAGC AGCAGCCAGC
  TGCAAGACAG ATTCCCAGCA GACGGAATGC AGGTGAGATA GCAGCAGAGC TTGAGAGAGC
  TCAGCCTAAA GGGGGCATGT GGGGTTTGGA GAGTTTTAGA AACTTTTATT GTAGGAACAC
  R
  TGTGTTAGTG TGCCAGATGG AAGCAATTAT GGCAGGGAAA CTTTGCCCCA GCCTTAAAAC
  TAAATTCCAA TACTGTGAGC TCAGGCTAAT GACTCCCCTC CAGGACAAGC AAAAGCAGAC
  CACAGTGAAT TTTCAAGATT GACTTCACAT TACATCAGGT CACGATTGGC CCTACTAAAA
  ACCCATCTGA ACTTTGTAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	PWD/PhJ
ss37896491	NES08649258	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	PWD/PhJ
rs27710372					SNP	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37896491	NES08649258	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:13364989 () rs orientation: forward

Symbol	Name	Function Class
Rr589139	regulatory region 589139	within coordinates