rs27710371 SNP Detail

Summary

• ID
  rs27710371
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:13365303 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTCACTGG GAAAAGATGT GACTTCAAAC TCACTCATAT
  AAATAAGTAT GCTTGCCTGT AATCTATCTT ACAAATCTCA TCTGACACTG GACTTTTACC
  R
  TCTGAGGAGC AGAAAGCACA ATTAGGATTG CTGATGAATA GCGTGATTAT TCCAGATAGG
  AGAAATCAAC TCCATTGGAA TATTTCTGCA CATATGGTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss37896490	NES08649261	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	A	A	A	G	A	G	A	G	G	A	G
ss146029427	ENSMUSSNP1988868	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs27710371					SNP	A	A	G	G	A	A	A	G	A	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37896490	NES08649261	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:13365303 () rs orientation: forward

Symbol	Name	Function Class
Rr589139	regulatory region 589139	14 bp distal