rs27710363 SNP Detail

Summary

• ID
  rs27710363
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:13366473 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACTTGTGTG ACAAAGTAGC TCTACTATTC TGTCCTACTT
  AATCAGATTT CCTCAACAAT GCTGTTTTAT CATTGAACTC TGAGTGTTGA GCCCCTTACT
  S
  GGATCCAATT TAATCATTTG TTTTGGAAAC CTACAATATT AGCAAACATA AATGTTGTGA
  AGAACCAAAT CTCCACTATG AAATAACCGG TGAATTTCC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss37896482	NES08649272	PERLEGEN	MM_PANEL2	f	SNP	G	C	C	G	G	G	G	G	C	C	G	G
ss45628436	mCV22945859	ABI	CRAMUS_MOUSE	f	SNP		C						G
ss146029435	ENSMUSSNP3753576	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs27710363					SNP	G	C	C	G	G	G	G	G	C	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37896482	NES08649272	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:13366473 () rs orientation: forward

Symbol	Name	Function Class
Rr589139	regulatory region 589139	1184 bp distal