CTGCAGGAGT TGCACCATGC TAAGAGCTAA TTTTAATGTT TGCCTCCTTA TTAAGGTCAT AGAGTCCTTG AATCTTCAGC AAGTTTCTTT GGCTTCTTAG B ATCTCTTCCA TTGGACACAG TCTTCAAAGA TGCTTTCCTG GATATTAGTC CCTATTCTTG TACAAAAGGT TTGCTTCCTG ATTGCATTTC TCTCTCAGA B = C/G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37855829 | NES08652297 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | G | C | C | C | C | C | C | |
ss145988936 | ENSMUSSNP5218552 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | T | ||||||||||
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs27672303 | SNP | C | C | C | C | C | C | ? | C | C | C | C | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37855829 | NES08652297 | PERLEGEN | MM_PANEL | f | SNP | C/G |
Location: Chr4:9568288 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Asph | aspartate-beta-hydroxylase | Intron | ||||||
D4Mit263 | DNA segment, Chr 4, Massachusetts Institute of Technology 263 | 1558 bp proximal | ||||||
Gm19130 | predicted gene, 19130 | 1675 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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