TGCAGGAGTT GCACCATGCT AAGAGCTAAT TTTAATGTTT GCCTCCTTAT TAAGGTCATA GAGTCCTTGA ATCTTCAGCA AGTTTCTTTG GCTTCTTAGC R TCTCTTCCAT TGGACACAGT CTTCAAAGAT GCTTTCCTGG ATATTAGTCC CTATTCTTGT ACAAAAGGTT TGCTTCCTGA TTGCATTTCT CTCTCAGAT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37855828 | NES08652298 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | G | A | A | A | G | G | A | ||
ss145988939 | ENSMUSSNP4579 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | G | |||||||||||
SNP Consensus Information | |||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs27672302 | SNP | A | A | A | A | A | A | G | G | A | A | A | G | G | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37855828 | NES08652298 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr4:9568289 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Asph | aspartate-beta-hydroxylase | Intron | ||||||
D4Mit263 | DNA segment, Chr 4, Massachusetts Institute of Technology 263 | 1557 bp proximal | ||||||
Gm19130 | predicted gene, 19130 | 1674 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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