rs27652351 SNP Detail

Summary

• ID
  rs27652351
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:178162603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCAAACTTC AGCCCATCCA AGTCCATCAA GGCATGCCCC
  TGTGGGGAGA GCAGCAGGGC TCCTGCCTGC TACCTCCTTC TGGTTCTAGC AGAAGATGGG
  S
  CACCTGGGCC AAACTCCCAA GAAAGCATCA CCCGTGTCCA CGCGCTTGAC TCTGTCTTGT
  TAATTTTTAG CCAGTTGGTC AGGAAGAAAG TACCCAGTTT                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	FVB/NJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss37847673	NES08725152	PERLEGEN	MM_PANEL2	f	SNP	G	C	G	G
SNP Consensus Information
SNP					Consensus Type	FVB/NJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs27652351					SNP	G	C	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37847673	NES08725152	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:178162603 () rs orientation: forward

Symbol	Name	Function Class
Rr572420	regulatory region 572420	1462 bp proximal