rs27637364 SNP Detail

Summary

• ID
  rs27637364
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:169509370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGATGCTGA CATCGCTCCA
  GCTTCCCAAT GACCAGGATG TAAGATGGCC CCATGGTTGA CTGTAAACAA AATCTGCGAG
  GCTCAGATGT GGAGCAGCCC TGCCCTGACT CAGCTATGGG GCCTTACTGA CCTTTCTTAA
  CCTTTGTGAT TTTTTTCCCT CAAAAGAACA AACCTAAGAG AGCAAAATTA TTTCTGTCCC
  R
  AGTTCAGACC TACTGGAAAG GGCACTGAGG AAGGTGGGCA GCAGGGAGGA CCCGTGTTGG
  CTTGCACTGC CAAGCTCTAG AGACTGAATT GTGCCCTGTG CGGTGAAATG GTATCAGTGT
  GCCACCCAAG TCAGAATGGT AAAAGCAGGT TAGCCAGCAT TGCGTGTTTC CAGAGAGTGG
  TGTGCGCTCT CCCAGACTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37821296	NES08718693	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27637364					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37821296	NES08718693	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169509370 () rs orientation: forward

Symbol	Name	Function Class
Gm34344	predicted gene, 34344	25 bp upstream
Rr571230	regulatory region 571230	511 bp distal
Tshz2	teashirt zinc finger family member 2	Intron