rs27630694 SNP Detail

Summary

• ID
  rs27630694
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148454685 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAAGATGA AGGTGCATGC
  AGGGCTGGTT TCTGGAAAGG TCTCTCCCCA TAGCTTGCAG AGAACCCCTT TTTTTCCTGT
  ATCCTCTGAT GGCTTCTTCT CTGTGTGCCT CTGTCCTGGT AGCTCTTTTT CTTCTTCTTG
  TAAGCATGCC AACCATTTAC TGTTCTCCAA AGGTCCATGC AATAAAGGTT CAGACCTCAG
  M
  GTGATGCTAC TGGAAGGTGG TGAGACCTTC CTTAAGAAGT GAGGACTGAG AGCTGGAGAG
  ACAGCTCCGA GGTTGACCCT GGTTCAATTC CCAGCACCCA CACAGCAGCT CACAACTGTC
  TGTAACTTCA GTTCTAGAAA ACATCAATGC ACCCACAAGT AAGTCAATCT TAAGACGTGA
  GGAGCGGTGG GAGATCTTGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	FVB/NJ	NZW/LacJ
ss37804222	NES09119892	PERLEGEN	MM_PANEL2	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	FVB/NJ	NZW/LacJ
rs27630694					SNP	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37804222	NES09119892	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148454685 () rs orientation: forward

Symbol	Name	Function Class
Gm13200	predicted gene 13200	within coordinates
Rr604663	regulatory region 604663	1125 bp proximal