rs27630691 SNP Detail

Summary

• ID
  rs27630691
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148456603 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGTGTAGA TCAATGGACA
  CACCATCTGT GTGGTGGTGT CAAGGGTCTC CATACATGTC ACACTTAAAA AGGAGTATAT
  TGCATATATT GAATTCCATT GTACCTCAAT AAGCTGCCAT ATAAATAAAT AGGTGACTGA
  AAGATAGACT GATTTATAGA AATCAGAGCC CCCAATTGCA ACGTAGCATG CTGGATTGAA
  Y
  CCATAAACAG CAAAAGGACA CGAGGGACTC AGTGGGAAAG GTGCCTATTG TGTCAGCATG
  AAGACATGAG TTTAGATCCC AGCATCCATG TGAAGACTGG ATGTGGCTAT GGATGTCTGT
  AACCTCAGTA CTAGCAGAAG GACGGAGACA GAGAGACCCT GGAGCTCACT GGCCAGCCAG
  CTCAGCTAAC CAATGAGCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	MOLF/EiJ
ss37804219	NES09119751	PERLEGEN	MM_PANEL2	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	MOLF/EiJ
rs27630691					SNP	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37804219	NES09119751	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148456603 () rs orientation: forward

Symbol	Name	Function Class
Gm13200	predicted gene 13200	within coordinates
Rr604663	regulatory region 604663	65 bp distal