rs27627897 SNP Detail

Summary

• ID
  rs27627897
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:143104690 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAAAGCTAT CTTTATCTTA
  CTAAGCCCCA ACTTTTGCTT CATATGAATA ACTAAGTACC AGCCAGGCGA GGTTACAGAA
  GTGAGAAAAG TAACTGACAC AAGCCAGAGG CCATGCTAGA GTCTGGTTAC CTCCTTCTAT
  CCGAGTGGGA AAGGTCCTCA GCCCTGAGCG TTCTGCAGCT CCCACCAGGA ATCCTTCCCC
  R
  AGTCTGATTC CAAGATGGCT CAGCTCTGGG CTCCCTGTCC TAATTTGTCC CATCATCTTG
  AATGTTTATC TGTTTTCCTG TCTGTTGGGA AACTGATGTT GGATGGATGG GTTGATAGGT
  GGGTGGGTTG GTGGGTGGAT GGGTGGGTGG AAAAGAGCTC CTTAAAGGCC TTTGCTACCC
  CACAGTGCTT GTGGGCACCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	MOLF/EiJ
ss37794127	NES09118292	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	MOLF/EiJ
rs27627897					SNP	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37794127	NES09118292	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:143104690 () rs orientation: forward

Symbol	Name	Function Class
Rr604202	regulatory region 604202	1234 bp proximal