CAAGA GACTTGTATG AGGATGAATT R GTGCCCCTTT TTGAGAAGGC TGGTC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37777071 | NES09154310 | PERLEGEN | MM_PANEL2 | f | SNP | G | G | G | A | A | G | G | A | A | G | G | A | G | G | A | ||
ss147565423 | ENSMUSSNP6137749 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | |||||||||||||||
ss321354958 | CHEV_4_135883195 | CHEVERUD | SCREENING_POP | f | SNP | G | A | |||||||||||||||
SNP Consensus Information | ||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
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rs27623040 | SNP | G | G | G | A | A | G | G | A | A | G | G | G | A | G | G | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37777071 | NES09154310 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr4:136054591 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Hnrnpr | heterogeneous nuclear ribonucleoprotein R | Coding-Synonymous | ||||||
mRNA-UTR | ||||||||
Noncoding-Transcript-Variant | ||||||||
Rr602351 | regulatory region 602351 | 987 bp proximal | ||||||
Rr602352 | regulatory region 602352 | 1371 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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