rs27619751 SNP Detail

Summary

• ID
  rs27619751
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169943477 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCCCCCGT GTGGCCAAAA
  GCTGCGTAAC CTGCACGAGG AACGGGGGAC AGAGCTTCTC TGCTACACCA AGTCAGGAAG
  TTGCCCTCAT CTGCTTCCTT TACAACCAAA CCCTGACCTT CCAGAATTCT CCAGCGAAAA
  GTAACCCAAC CTGACGAGGA CTTCCCTTCA GTGTATCCTG ACTTCATTGC CGAGGTCATA
  M
  TTTGACCCTG GACCTTAAGT TTCCCGATAC GTACCAAGGA GCAGAGGACG CCATACTCTG
  TGAGGTTCAG ATATAAAAAA TGGAAAGCAA GGAGTCAGCC AGATTGTTTG GAGAGTAAGA
  AGTGCCTGCC CCACGTGCCT GATGAACTAA GAGAGACTCC CCAGAGCCCA CATAAAAGTG
  AAAATAGAGA GCCATCTTCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37818794	NES08707563	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27619751					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37818794	NES08707563	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169943477 () rs orientation: forward

Symbol	Name	Function Class
Rr571323	regulatory region 571323	within coordinates
Rr571324	regulatory region 571324	182 bp distal
Rr571325	regulatory region 571325	797 bp proximal