rs27615895 SNP Detail

Summary

• ID
  rs27615895
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148352024 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTATACAT AGTTGGTCGT
  GTGCCAATCA CACCTCACCA AATGTTTTAT TTTCTCAACC TCATACATAA TAGCCAAGAA
  AAAAACAATC TCTGACCGTC TGACTTTGAT GAATTAGATA ATTTTTCTTT GAGTGAAAGA
  GCTGAACATT AAATCAGTCA TTTACTGTGT ATACATTAAT TTATATAGCA TATACAGAGT
  R
  TTTTATGGGG AAAGGGGGCT GGAGAGATGG CTTAGTGCTT AAAAGCACTT GCTGTTCCTG
  CGGAGGTCCT GAATTTAGTT ACTGGCACCC ACATGGTAGC CTACTATTGT CTGTAACACC
  AGCTGGAAGG GATCTGAGCC CTCTTCTGGC CACCATGGGT GCCACACACA CACACACACA
  CACACACACA ATTCACAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss37804828	NES09104944	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	A	A	A	A	G		A	A	G	A		A
ss321418734	CHEV_4_147641676	CHEVERUD	SCREENING_POP	f	SNP									A					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs27615895					SNP	A	G	A	A	A	A	A	G	A	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37804828	NES09104944	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148352024 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Disp3	dispatched RND transporter family member 3			Intron
				Noncoding-Transcript-Variant
Rr604636	regulatory region 604636			398 bp distal