rs27614432 SNP Detail

Summary

• ID
  rs27614432
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:144287538 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGGGTAGT TACAGATTGA
  TTACATTATG GTGGTCCAGA AGAACTGGGG GATATGTGTG AGTTTCAGAT CTTGGATGAG
  CCAGTGGCTT TGAGAATGAA TGGACAGAAA GGAAAATACC AAGTACTTGG CCATGTGTGA
  CCCTGTGTTC CCTCCTTGAC TAAGACTTAT TATAGAAAAC ATTTCCATAG ACATGCCAAA
  Y
  TTATTGATTG ACACAACCTG CAGCCACAAT TTGGGCCCCC TAGAAGGATT TCTGACTGCT
  GCTTTCTTTA GCTACCTGCT AATAATTCCC AAAGGGAATG TAGATATAGT TAGGTCAGTC
  ATGAGAACCA CTTCCTTTCC CATGCTTCAG AAATGCCTCT TACCAAGGCT ACCAAACACA
  CCACCTCCTC CATGGTAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37800854	NES09127865	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27614432					SNP	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37800854	NES09127865	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144287538 () rs orientation: forward

Symbol	Name	Function Class
Aadacl4fm2	AADACL4 family member 2	Intron
Rr604231	regulatory region 604231	950 bp distal