AACCCCCATC CCTGGCTGAG TCAGTTTTCT CTGCAGGTGT GGCTACTGGT AGGTCACCCA TGCTCCAGTG CACAGCCCCA CACCCAGGAA GATGTGAACA GAAAATTGTA AACAGTGGAT TGCTAAAAAC AAAACCTGAA GCTGGAAGTG TGGGGAGATG GGGTGGATCT GGTAGAGTTG GTGGGAGGAG AGGAGTGAAC W GGACCAAAGT ACATTGTGTG CATGTGTGAC AGTCTCAAAG AACGAAAAGA TCCTATCTTT TAAAAATTAT CCCTGTCAAC CTTAGCTTTT CCAATAAACA TAACTTGCTC TGTTACTTAC ATGTTTGAAC GGGCAGATTC AAGGCAGAAG TGTTAAATGT GTTATCAACA TTCCTGTTGT TAAAATACAT ACACAATTGA W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37780892 | NES09153731 | PERLEGEN | MM_PANEL2 | f | SNP | T | A | A | A | A | A | A | A | A | A | A | A | A | A | A |
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs27608468 | SNP | T | A | A | A | A | A | A | A | A | A | A | A | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37780892 | NES09153731 | PERLEGEN | MM_PANEL | f | SNP | A/T |
Location: Chr4:134948220 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Clic4 | chloride intracellular channel 4 | Intron | ||||||
Rr601951 | regulatory region 601951 | 954 bp distal | ||||||
Rr601952 | regulatory region 601952 | 1072 bp distal | ||||||
Rr601953 | regulatory region 601953 | 690 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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