rs27595156 SNP Detail

Summary

• ID
  rs27595156
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:139425080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAGGGTAA GGCCCACCTG
  GCCTGTGCAC ACAGCCTGGG GGGGGGGCGG GGAAGAGTCT CCCTTTCTCG TTCTTCCTTT
  CTTTTTTATT CCTTCCTTAA GAACCAAACC CCTAAATGAC AATCTCCCAC GATTTGGAAA
  AATGGCTCTC ATCCCGTGTT CTCTGGAACA TTTTTATGGC CCTTTCCAGG CAGGGATGTG
  M
  CGCCCAGGAA CAAGAGCCGA GTTCCCAGCC CCAGCCTGGA GGATGGGGGG AGGCCCATCC
  ATCTTTCCAG CTGGCGGGCC CCTTGTGGGA AAGACCACTG GGCCGCTGGG CCGGGGAGGG
  GGTTGGGGAC ACCTGCTGTG GTCATTCTTC CTAAGCTCTC TGCAGAGGTG GTGACCGGCT
  GGGGGCAGAC AGGGACCTTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss37792476	NES09134089	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs27595156					SNP	A	A	A	A	A	A	C	A	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37792476	NES09134089	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139425080 () rs orientation: forward

Symbol	Name	Function Class
Rr603286	regulatory region 603286	within coordinates
Rr603287	regulatory region 603287	875 bp proximal