GGCTC TGGGCAGCCT TTTGCCTGCA Y TGGATCTCAC GGCTGGCCTT GCTTC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | BALB/cByJ |
DBA/2J |
KK/HlJ |
LG/J |
NZW/LacJ |
PWD/PhJ |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37768089 | NES09139857 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | C | T | ||
ss321374274 | CHEV_4_138050694 | CHEVERUD | SCREENING_POP | f | SNP | C | T | |||||
SNP Consensus Information | ||||||||||||
SNP | Consensus Type | BALB/cByJ |
DBA/2J |
KK/HlJ |
LG/J |
NZW/LacJ |
PWD/PhJ |
SM/J |
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rs27576560 | SNP | T | T | T | C | C | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37768089 | NES09139857 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr4:138222090 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm32549 | predicted gene, 32549 | 1700 bp upstream | ||||||
Rr602944 | regulatory region 602944 | 737 bp distal | ||||||
Rr602945 | regulatory region 602945 | within coordinates | ||||||
Rr602946 | regulatory region 602946 | 860 bp proximal | ||||||
Rr602947 | regulatory region 602947 | 1158 bp proximal | ||||||
Rr602948 | regulatory region 602948 | 1460 bp proximal | ||||||
Rr602949 | regulatory region 602949 | 1763 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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