rs27501359 SNP Detail

Summary

• ID
  rs27501359
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:110146897 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGAAAAT ATTTACCTGA
  TATTTCTATG CAGGTCATAG AAGGTGAAAT TTTTAGCACC TCTTTTTTTC TCATCCATAT
  TAATCACGGT ATACTCTTTG AGCCCTAAAT TAACATTAGG TATATTTAAA AACATTCCGG
  CCATGTTTCC AAAATAGTAA CTATACATTA TATCATAAAC AATTACCTGG TCTTCCTAGG
  M
  TAAAAAAAAA AATGCACGCG CTTTGTATAT TGATCACTTC TGCAAAAAAA AAAAACCCTC
  CACTCTAAAG TCTTTCAAAG GAATCCTCAA ACAAACGCAC AAATGTCCTC AGAGGCCTTT
  TCTCTAAAGA CAAAGGCTGA ATCCTATTGT TGGGAAAAGT CAACCTTATT ATCGCATTTC
  CAATAGTACC ATTCATCTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	MOLF/EiJ
ss37708881	NES09224412	PERLEGEN	MM_PANEL2	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	MOLF/EiJ
rs27501359					SNP	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37708881	NES09224412	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:110146897 () rs orientation: forward

Symbol	Name	Function Class
Elavl4	ELAV like RNA binding protein 4	Intron
Rr597420	regulatory region 597420	1683 bp distal
Rr597421	regulatory region 597421	562 bp proximal
Tssr42791	transcription start site region 42791	1184 bp downstream
Tssr42792	transcription start site region 42792	1217 bp downstream