rs27492722 SNP Detail

Summary

• ID
  rs27492722
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:109765240 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTGGCAAA ACCATGTTTT
  ATAAAGTTTC TCCCTAAATG CCCTCAGGAA TCTAACACTG AGAAAAGAAA AAGCCTGCTG
  CCAGCTCGAG GGGAACTTCT CTCCCGAAGG TGATTTAACA ACTTGCCAGA CTACCTGGCA
  GCAGAGTCTG ACCCTGAAGA TCATATTGGG ACCTCCCTTT GACTGGAGCT GCCTAGCTGC
  R
  CCCTCTATGG AAACCACAAC CATGGGCTAT GATACCAGAG TTGGGTTTGT GAGGTCATGG
  ACCCTCTGAG TTCTTCCTCC AATGTGGTCA CATTGGACAA TTCTTGTTTT CTGCTTTAAG
  GGGAAAAGTG TATTCTCCAT GCTACAATGA CAGTGTAACA GGAAAAGGTA GTGTAATAGA
  CCACCAGACA GGGGTAAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss37676954	NES09047465	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs27492722					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37676954	NES09047465	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:109765240 () rs orientation: forward

Symbol	Name	Function Class
Lgr4	leucine-rich repeat-containing G protein-coupled receptor 4	Intron
Rr562518	regulatory region 562518	982 bp proximal