rs27387638 SNP Detail

Summary

• ID
  rs27387638
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:152788413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAG AGCAGGTACT GGCTGTATGG
  R
  CCTGCCAGCC CTGTTTGTAT GGATG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss37561165	NES08926879	PERLEGEN	MM_PANEL2	f	SNP	G		G	A	G				G		G
ss45211764	mCV23536543	ABI	CRAMUS_MOUSE	f	SNP		G	G			A	G
ss147977605	ENSMUSSNP5649446	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G				G
ss320563536	CHEV_2_152772229	CHEVERUD	SCREENING_POP	f	SNP								A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs27387638					SNP	G	G	G	A	G	A	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37561165	NES08926879	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152788413 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dusp15	dual specificity phosphatase-like 15			Intron
				Noncoding-Transcript-Variant
Rr567515	regulatory region 567515			625 bp proximal