rs27387636 SNP Detail

Summary

• ID
  rs27387636
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:152790831 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCAAGACT TCTAGGGTCA
  GATGGCCTAT GTTCAAATCC CAGTTGGCCA GCTTCCTCAC TGTATGACCT TAGATGACTT
  CATTTACCTC TTTGGCCTCA ATCGCCAAAT AGCGGTGTTA AAACAGCCTA ATGAGGAGGA
  TGGATGAGTC AGCTGGGGTC CAGATGGTAG CCAAGGATGG TGGCTCAGGG ACAGAGCACT
  R
  ACCTAGGGTG TTCAACACCT TAGGCTCTAT CTTCACCACT AGGAAGTAGG AATGGGATGA
  AGGGCAGCCC TGGACCGACA GCTTTCTGTC CCACCTACCA GCCCTGTAAT GGAGAGTTTG
  GAGTACCTGC AACAGAGGCT GGGGTGATTC GTGGATAGAG ATGATATGTG TGATCTTATT
  CCGGCCCAGC TGATCCGGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	WSB/EiJ
ss37561163	NES08926755	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	WSB/EiJ
rs27387636					SNP	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37561163	NES08926755	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152790831 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dusp15	dual specificity phosphatase-like 15			Intron
				Noncoding-Transcript-Variant
Rr567515	regulatory region 567515			1462 bp distal
Rr567516	regulatory region 567516			1637 bp proximal