rs27361765 SNP Detail

Summary

• ID
  rs27361765
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:102378038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCAGATATC CTATTTTGTG
  CCATTTTTCT TCTCTTTAAT ACCATTCTAT TTTGTTTTGT TTTTCAAGAC AGGGTTTCTC
  GGAGCAGTCT TGGATGTCCT AGAACTTGCT CTGTAGATCA GGATGACTTC AACTCAAGAG
  ATCTGCCTGC CTCCTGAGTG CTGAGATCAA AGTTGTGTGC CACCACCAAC TGGCTTCAAT
  S
  CCATTCTTGA TGCTTGCTTA TACAAATGTC TCCTGGTTGG AGAAGTTGAC AATGAGGGAG
  AAAGCTCATA CTGAGTTTTC TAAAGGTCAG TCTCAGGACA GACAATGATG ATGCCTAATA
  TTTATTTACA GCAGCCGTGT GTGCTAGGCG TGCGGTATCT TTGCATGAAT AATCTCATTC
  CATCTTTCCA AGAGTTTCTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss37577484	NES09063542	PERLEGEN	MM_PANEL2	f	SNP	G			G	G	G	G	C	G	G		G	G		G
ss147115121	ENSMUSSNP6852465	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C
ss320438705	CHEV_2_102387850	CHEVERUD	SCREENING_POP	f	SNP											C			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs27361765					SNP	G	G	C	G	G	G	G	C	G	G	C	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37577484	NES09063542	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102378038 () rs orientation: forward

Symbol	Name	Function Class
Rr561703	regulatory region 561703	1938 bp proximal