rs27335855 SNP Detail

Summary

• ID
  rs27335855
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:157935961 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTACTTACA GTGCGTACAT
  CTCTATACTC TGGCTTAAGG ACCTACTGTG CAATACATTG GCCCAGGGAC CTACTGTGTA
  ACAAGCCTCT AGATATGTGC TAGGCTAAAA GTCAGATTCA AATGTTTAAT TTTCCTAGAA
  AGGATCTCGG TGACATCGCC TCCCTGTGGG ATTTGTTTCC ATTTCACTGA AATCAGATTA
  S
  TCCACTCAGA AGGCTTCAGG TTCAGGCAAA GAGCCTCACC CTTGGACTCC ATGGAAGCCC
  CAACCGGAAG ACTGCAGATC TGATCCTAAG TCCTTTCAGA CTTCCCAGGA AGCTCTCTCT
  GGAGGTGAGC ACCGCCTGCC TGCCGCACAG AAAGGAAGGA CACAGGAAGT TAGAAGCAAA
  CGTTCACTCT AGGTCCCTGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss37544307	NES08896952	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs27335855					SNP	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37544307	NES08896952	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:157935961 () rs orientation: forward

Symbol	Name	Function Class
Rr568641	regulatory region 568641	275 bp distal
Rr568642	regulatory region 568642	82 bp proximal
Rr568643	regulatory region 568643	1254 bp proximal