rs27321577 SNP Detail

Summary

• ID
  rs27321577
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:160468824 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCATAAAT TGCTTTTGCG
  ATGATATACT GCACTATCCA GCTGAGAGAG AGAAAAAATT ATGGGTGATA AACCCAAGTA
  AAACATTTTG GGCTAGTCTG AGATTTGAGC TGCGGAAGAC ATAGGGCAGG TGATTTTCCC
  ATACAGAGTC TGAGCAGTAT GTTGCTGGCC AAAGGGCAGC TAAAGGTCAG CTGTGCTGCA
  R
  AAAGGTCCTC AACCATCAAA ATCCAGAGAG AGGAGAGAAT TAAGCCAATT ACAACATCAG
  GAGCCCATAA GAAGGGCACT TGGAGCCGGG CCTGGTGGCA CATGCCTTTA ATCCCAGCAC
  TCGGGAGGCA GAGGCAGGTG GATTTCTGAG TTCGAGGCCA GCCTGGTCTT CAGATTGAGT
  TCCAGGACAG CCAGGGCTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MOLF/EiJ	NZW/LacJ
ss37532805	NES08877055	PERLEGEN	MM_PANEL2	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MOLF/EiJ	NZW/LacJ
rs27321577					SNP	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37532805	NES08877055	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:160468824 () rs orientation: forward

Symbol	Name	Function Class
Rr569035	regulatory region 569035	364 bp proximal
Rr569036	regulatory region 569036	690 bp proximal
Rr569037	regulatory region 569037	762 bp proximal