rs27269733 SNP Detail

Summary

• ID
  rs27269733
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:133579866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGAAGCCT TTCCACTGTG
  TATTGTACAC ACGCACACAC ACAGACACAC ACAGACACAC ACAGACACAC ACAGACACAC
  ACACACACAC ACACACACAC ACACACACAC ACACACACAC TATTGAACTA AAGAAACCAT
  TGCCAAATGG GTTCTATGAA GTCACCTGTT CCTACTGAGG CTAGCTAACT CCTCCCACCT
  R
  TGCTATACAC ACTAAATCCT CTGAGGTTCC AGGTTGTTGT GTGGTTGGTG CCACTCCATC
  AGAGAGCACA GAACTTACTT GACCCCAGCC TTTCTGTACC TGTGCTTCTC ATTTCTTCTT
  TTTATTGAAC CCTGTATTCA GGTTCCAAGG ACCATGTTGT GTTGCATGTG GCATCTGAAA
  ACTATTCCTG CCATTTCCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss37460163	NES08978406	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	G	A	G	G	G	A		G	G	G	G
ss320511727	CHEV_2_133563682	CHEVERUD	SCREENING_POP	f	SNP										A					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs27269733					SNP	A	G	A	G	A	G	G	G	A	A	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37460163	NES08978406	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:133579866 () rs orientation: forward

Symbol	Name	Function Class
Rr565635	regulatory region 565635	763 bp proximal