About   Help   FAQ
rs27264357 SNP Detail
Summary
  • ID
    rs27264357
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr2:143821058 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          TAGATTCCCA AACAGCTCTG CCTAGGACAG ACCCAGCTTA
    TTTTCTTGCT TCTAAACAGT GTATGCACTG AGAAGTCTGC AGAATGCTAG GCTTGGAGAG
    R
    TAAGTAGAAA AGAGGACCAC ATATGCAACA CAGCAGGCAC AGAGCGGTCA AGCAACAAAG
    CAGCATGCTG GGGCCTAGAG AATGCAGATA CAATGGAAG                       
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss37482895 NES08934561 PERLEGEN MM_PANEL2 f SNP A G G G A G A A G A A G A A G
ss147776927 ENSMUSSNP343602 ENSEMBL ENSEMBL_Sanger f SNP A G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs27264357 SNP A A G G G A G A A G A A G A A G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss37482895 NES08934561 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr2:143821058 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr566349 regulatory region 566349 1627 bp proximal
Rr566350 regulatory region 566350 1834 bp proximal
Rrbp1 ribosome binding protein 1 Intron
Noncoding-Transcript-Variant

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory