AATCTCTTGG CCATGACATC ATGGTCACCT GGCCCCAGAA TGATACCAGC CTACCAGCTG GGGAAGGAGA GGGTTTTCTT CAAAAAGCTA TCCACAGAGT R TGATAAAAGT ACCAGAGCCC CTGTCTCACT AAATAAAGAG GTTACGGGCT CTGTGGTAGA GTCCTCATCA GACCTGGGTC TCAACTCCTC TTCCTCTGA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37482872 | NES08934595 | PERLEGEN | MM_PANEL2 | f | SNP | A | A | A | A | A | G | A | G | A | |
ss147777034 | ENSMUSSNP5583814 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | ||||||||
SNP Consensus Information | |||||||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
||||
rs27264334 | SNP | G | A | A | A | A | A | G | A | G | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37482872 | NES08934595 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr2:143823820 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr373991 | regulatory region 373991 | 67 bp upstream | ||||||
Rr566349 | regulatory region 566349 | 397 bp distal | ||||||
Rr566350 | regulatory region 566350 | 907 bp distal | ||||||
Rr566351 | regulatory region 566351 | 292 bp proximal | ||||||
Rr566352 | regulatory region 566352 | 1111 bp proximal | ||||||
Rr566353 | regulatory region 566353 | 1710 bp proximal | ||||||
Rrbp1 | ribosome binding protein 1 | Intron | ||||||
mRNA-UTR | ||||||||
Noncoding-Transcript-Variant | ||||||||
Tssr26572 | transcription start site region 26572 | 1264 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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