rs27258164 SNP Detail

Summary

• ID
  rs27258164
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131593332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATTCATACA GTTGCTTTCA GTCTATAGGT CAGCTGATAA
  CTCATGACTC AAAGACTCCA ACTGTAAACC ATGTCGTTGG TCTTTGCAGT ACAGCTGAAG
  Y
  CATGGCTTAG CACCATCATC AGTCATCATT GGTGGACTAT CATGGTCGGC CCAGGCCCTC
  AGGCAAAGGA GGTACTTCTT TTAGGAAGAA GAAATGTAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss37467988	NES08991602	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs27258164					SNP	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37467988	NES08991602	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131593332 () rs orientation: forward

Symbol	Name	Function Class
Gm30986	predicted gene, 30986	1987 bp downstream
Rr565306	regulatory region 565306	784 bp distal