rs27244683 SNP Detail

Summary

• ID
  rs27244683
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131480272 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGGTACAA AGCCTGCGTG GACCTCTTTG TGATTACACC
  ACAGTGCCAC AGAAATGGTA ACGTGAAGGC CAAGTTCAAA GGCATTTCCA AGCTCAGACA
  S
  CCATGGATCT ACTATTTATT GCTGTTAGTT CTTGCTGTTC TTGAGTTAAC GTTAGCCCTC
  TTTTTGACAT TCACGGGTGA AGGCAGAATC CAGGGGTAGA                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss37468402	NES08993703	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	G	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs27244683					SNP	C	C	C	C	C	C	G	C	C	G	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37468402	NES08993703	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131480272 () rs orientation: forward

Symbol	Name	Function Class
Rr373874	regulatory region 373874	419 bp downstream
Rr565298	regulatory region 565298	682 bp proximal