rs27152691 SNP Detail

Summary

• ID
  rs27152691
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:35568910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCACCGAGA GGAGCTGGGG
  GTGGGGGGCA AGTGAGGAAG GGATGTGCTC AGTGGGCTAG AGCACCTGGC CTGCCGCTTC
  ATACTGCTCT CTGTGGCACA GTGTGACAAG CTGTGGCACA GTGTGACAAG TCAGCTCTCA
  GGAGTCAAGT GTGAGGCAGT GATAGCATTT GAGGTTTGAA AGAAATAAGT CTCTCAGCTG
  R
  CAAAGCAGGG ACAGTTCACT GAGACAGACA GACAGAGGGA ATCCCGTGGG TGAGCAGAGG
  GCTTCAGAGG TCTAGAGCCC TTCTGTGTTC TTGAACAAGC TGCGGGAGGT GCAGAGGAAA
  CTCAGTACTG GGAGAATGGG AGCAGTTCTA AAGGCAGGAG CAGGGATAAG GAGAGGTGAA
  GAGACTGAGG GAGGAAGAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss37391812	NES08749506	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs27152691					SNP	A	A	A	G	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss37391812	NES08749506	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:35568910 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dab2ip	disabled 2 interacting protein			Intron
				Noncoding-Transcript-Variant
Rr373039	regulatory region 373039			64 bp upstream
Rr555757	regulatory region 555757			46 bp distal
Rr555758	regulatory region 555758			878 bp proximal
Tssr17486	transcription start site region 17486			1669 bp upstream