GTGCAACCTA GGACTAACCT GAGCTTTTTA TGTTCCTGTC TTGTTCTCTG TTTCAAACCT GTGGAGAAAC ACGAAGGAAT GAATGATGAC TGAAGTAAAA R GCAATTTCCT AAAGCCTTAT AATAAAGATC TGACTTTAAA ATGAGTGCCC CAAGCATTTC CTTCCCTCAC TCACATACCA TTCCCTATTA TTTCCAGAA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss37358734 | NES08785324 | PERLEGEN | MM_PANEL2 | f | SNP | G | A | A | G | G | G | A | G | G | G | G | G | A | A | ||
ss45316835 | mCV23553198 | ABI | CRAMUS_MOUSE | f | SNP | G | G | A | G | ||||||||||||
ss146342394 | ENSMUSSNP1273688 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | ||||||||||||||
SNP Consensus Information | |||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs27137013 | SNP | G | G | A | A | G | G | G | G | A | G | G | G | G | G | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss37358734 | NES08785324 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr2:20963455 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Arhgap21 | Rho GTPase activating protein 21 | Intron | ||||||
Rr552639 | regulatory region 552639 | 436 bp distal | ||||||
Rr552640 | regulatory region 552640 | 498 bp proximal | ||||||
Rr552641 | regulatory region 552641 | 1355 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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